1K6F image
Deposition Date 2001-10-16
Release Date 2002-01-30
Last Version Date 2024-02-07
Entry Detail
PDB ID:
1K6F
Title:
Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.30 Å
R-Value Free:
0.29
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:collagen triple helix
Chain IDs:A, B, C, D, E, F
Chain Length:30
Number of Molecules:6
Biological Source:
Primary Citation
Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3)
Protein Sci. 11 262 270 (2002)
PMID: 11790836 DOI: 10.1110/ps.32602

Abstact

The first report of the full-length structure of the collagen-like polypeptide [(Pro-Pro-Gly)(10)](3) is given. This structure was obtained from crystals grown in a microgravity environment, which diffracted up to 1.3 A, using synchrotron radiation. The final model, which was refined to an R(factor) of 0.18, is the highest-resolution description of a collagen triple helix reported to date. This structure provides clues regarding a series of aspects related to collagen triple helix structure and assembly. The strict dependence of proline puckering on the position inside the Pro-Pro-Gly triplets and the correlation between backbone and side chain dihedral angles support the propensity-based mechanism of triple helix stabilization/destabilization induced by hydroxyproline. Furthermore, the analysis of [(Pro-Pro-Gly)(10)](3) packing, which is governed by electrostatic interactions, suggests that charges may act as locking features in the axial organization of triple helices in the collagen fibrils.

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