1K3V image
Deposition Date 2001-10-04
Release Date 2001-10-24
Last Version Date 2024-04-03
Entry Detail
PDB ID:
1K3V
Keywords:
Title:
Porcine Parvovirus Capsid
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.28
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:capsid protein VP2
Chain IDs:A
Chain Length:579
Number of Molecules:1
Biological Source:Porcine parvovirus
Ligand Molecules
Primary Citation
The structure of porcine parvovirus: comparison with related viruses.
J.Mol.Biol. 315 1189 1198 (2002)
PMID: 11827486 DOI: 10.1006/jmbi.2001.5319

Abstact

The structure of baculovirus-expressed porcine parvovirus (PPV) capsids was solved using X-ray crystallography and was found to be similar to the related canine parvovirus (CPV) and minute virus of mice (MVM). The PPV capsid protein has 57 % and 49 % amino acid sequence identity with CPV and MVM, respectively, but the degree of conservation of surface-exposed residues is lower than average. Consequently, most of the structural differences are on the surface and are the probable cause of the known variability in antigenicity and host range. The NADL-2 and Kresse strains of PPV have distinct tissue tropisms and pathogenicity, which are mediated by one or more of the amino acid residues 381, 386, and 436. These residues are on or near the surface of the virus capsid, where they are likely to be associated with virus-cell interactions.

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Primary Citation of related structures