1K2W image
Deposition Date 2001-09-29
Release Date 2003-11-11
Last Version Date 2023-08-16
Entry Detail
PDB ID:
1K2W
Keywords:
Title:
Crystal structure of sorbitol dehydrogenase from R. sphaeroides
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.23
R-Value Work:
0.18
Space Group:
P 31 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SORBITOL DEHYDROGENASE
Gene (Uniprot):polS
Chain IDs:A, B
Chain Length:256
Number of Molecules:2
Biological Source:Rhodobacter sphaeroides
Primary Citation
Structure of zinc-independent sorbitol dehydrogenase from Rhodobacter sphaeroides at 2.4 A resolution.
Acta Crystallogr.,Sect.D 61 374 379 (2005)
PMID: 15805591 DOI: 10.1107/S0907444904034390

Abstact

Recombinant sorbitol dehydrogenase (SDH) from Rhodobacter sphaeroides has been crystallized in the absence of the cofactor NAD(H) and its structure determined to 2.4 A resolution using molecular replacement (refined R and R free factors of 18.8 and 23.8%, respectively). As expected from the sequence and shown by the conserved fold, SDH can be assigned to the short-chain dehydrogenase/reductase protein family. The cofactor NAD and the substrate sorbitol have been modelled into the structure and the active-site architecture, which displays the highly conserved catalytic tetrad of Asn-Ser-Tyr-Lys residues, is discussed in relation to the enzyme mechanism. This is the first structure of a bacterial SDH belonging to the SDR family.

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