1K2A image
Deposition Date 2001-09-26
Release Date 2002-04-03
Last Version Date 2024-11-06
Entry Detail
PDB ID:
1K2A
Keywords:
Title:
Modified Form of Eosinophil-derived Neurotoxin
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.00 Å
R-Value Free:
0.16
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:eosinophil-derived neurotoxin
Gene (Uniprot):RNASE2
Chain IDs:A
Chain Length:136
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Crystallographic and functional studies of a modified form of eosinophil-derived neurotoxin (EDN) with novel biological activities.
J.Mol.Biol. 317 119 130 (2002)
PMID: 11916383 DOI: 10.1006/jmbi.2002.5406

Abstact

The crystal structure of a post-translationally modified form of eosinophil-derived neurotoxin (EDN) with four extra residues on its N terminus ((-4)EDN) has been solved and refined at atomic resolution (1 A). Two of the extra residues can be placed unambiguously, while the density corresponding to two others is poor. The modified N terminus appears to influence the position of the catalytically important His129, possibly explaining the diminished catalytic activity of this variant. However, (-4)EDN has been shown to be cytotoxic to a Kaposi's sarcoma tumor cell line and other endothelial cell lines. Analysis of the structure and function suggests that the reason for cytotoxicity is most likely due to cellular recognition by the N-terminal extension, since the intrinsic activity of the enzyme is not sufficient for cytotoxicity and the N-terminal extension does not affect the conformation of EDN.

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Primary Citation of related structures