1JXU image
Deposition Date 2001-09-09
Release Date 2001-10-31
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1JXU
Keywords:
Title:
CRAMBIN MIXED SEQUENCE FORM AT 240 K. PROTEIN/WATER SUBSTATES
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
0.99 Å
R-Value Work:
0.09
R-Value Observed:
0.09
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Crambin
Gene (Uniprot):THI2
Chain IDs:A
Chain Length:46
Number of Molecules:1
Biological Source:Crambe hispanica subsp. abyssinica
Ligand Molecules
Primary Citation
On the nature of a glassy state of matter in a hydrated protein: Relation to protein function.
Proc.Natl.Acad.Sci.USA 98 11242 11247 (2001)
PMID: 11572978 DOI: 10.1073/pnas.201404398

Abstact

Diverse biochemical and biophysical experiments indicate that all proteins, regardless of size or origin, undergo a dynamic transition near 200 K. The cause of this shift in dynamic behavior, termed a "glass transition," and its relation to protein function are important open questions. One explanation postulated for the transition is solidification of correlated motions in proteins below the transition. We verified this conjecture by showing that crambin's radius of gyration (Rg) remains constant below approximately 180 K. We show that both atom position and dynamics of protein and solvent are physically coupled, leading to a novel cooperative state. This glassy state is identified by negative slopes of the Debye-Waller (B) factor vs. temperature. It is composed of multisubstate side chains and solvent. Based on generalization of Adam-Gibbs' notion of a cooperatively rearranging region and decrease of the total entropy with temperature, we calculate the slope of the Debye-Waller factor. The results are in accord with experiment.

Legend

Protein

Chemical

Disease

Primary Citation of related structures