1JR0 image
Deposition Date 2001-08-09
Release Date 2002-05-08
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1JR0
Keywords:
Title:
CHOLERA TOXIN B-PENTAMER WITH LIGAND BMSC-0011
Biological Source:
Source Organism:
Vibrio cholerae (Taxon ID: 666)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.30 Å
R-Value Free:
0.18
R-Value Observed:
0.13
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:cholera toxin B subunit
Gene (Uniprot):ctxB
Chain IDs:A (auth: D), B (auth: E), C (auth: F), D (auth: G), E (auth: H)
Chain Length:103
Number of Molecules:5
Biological Source:Vibrio cholerae
Ligand Molecules
Primary Citation
Anchor-based design of improved cholera toxin and E. coli heat-labile enterotoxin receptor binding antagonists that display multiple binding modes.
Chem.Biol. 9 215 224 (2002)
PMID: 11880036 DOI: 10.1016/S1074-5521(02)00097-2

Abstact

The action of cholera toxin and E. coli heat-labile enterotoxin can be inhibited by blocking their binding to the cell-surface receptor GM1. We have used anchor-based design to create 15 receptor binding inhibitors that contain the previously characterized inhibitor MNPG as a substructure. In ELISA assays, all 15 compounds exhibited increased potency relative to MNPG. Binding affinities for two compounds, each containing a morpholine ring linked to MNPG via a hydrophobic tail, were characterized by pulsed ultrafiltration (PUF) and isothermal titration calorimetry (ITC). Crystal structures for these compounds bound to toxin B pentamer revealed a conserved binding mode for the MNPG moiety, with multiple binding modes adopted by the attached morpholine derivatives. The observed binding interactions can be exploited in the design of improved toxin binding inhibitors.

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Primary Citation of related structures