1JFM image
Deposition Date 2001-06-21
Release Date 2002-02-20
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1JFM
Keywords:
Title:
CRYSTAL STRUCTURE OF MURINE NK CELL LIGAND RAE-1 BETA
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.85 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
I 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:retinoic acid early transcript beta
Gene (Uniprot):Raet1b
Chain IDs:A, B, C, D, E
Chain Length:174
Number of Molecules:5
Biological Source:Mus musculus
Primary Citation
Crystal structures of RAE-1beta and its complex with the activating immunoreceptor NKG2D.
Immunity 16 77 86 (2002)
PMID: 11825567 DOI: 10.1016/S1074-7613(02)00258-3

Abstact

Induced by retinoic acid and implicated in playing a role in development, rodent RAE-1 proteins are ligands for the activating immunoreceptor NKG2D, widely expressed on natural killer cells, T cells, and macrophages. RAE-1 proteins (alpha, beta, gamma, and delta) are distant major histocompatibility complex (MHC) class I homologs, comprising isolated alpha1alpha2 platform domains. The crystal structure of RAE-1beta was distorted from other MHC homologs and displayed noncanonical disulfide bonds. The loss of any remnant of a peptide binding groove was facilitated by the close approach of the groove-defining helices through a hydrophobic, leucine-rich interface. The RAE-1beta-murine NKG2D complex structure resembled the human NKG2D-MICA receptor-ligand complex and further demonstrated the promiscuity of the NKG2D ligand binding site.

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Primary Citation of related structures