1J73 image
Deposition Date 2001-05-15
Release Date 2001-05-30
Last Version Date 2024-10-09
Entry Detail
PDB ID:
1J73
Title:
Crystal structure of an unstable insulin analog with native activity.
Biological Source:
Source Organism:
(Taxon ID: )
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.27
R-Value Work:
0.20
Space Group:
H 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:insulin a
Gene (Uniprot):INS
Mutations:T8(DAB)
Chain IDs:A, C
Chain Length:21
Number of Molecules:2
Biological Source:
Polymer Type:polypeptide(L)
Molecule:insulin b
Gene (Uniprot):INS
Chain IDs:B, D
Chain Length:30
Number of Molecules:2
Biological Source:
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
DAB A ALA 2,4-DIAMINOBUTYRIC ACID
Ligand Molecules
Primary Citation

Abstact

The design of insulin analogues has emphasized stabilization or destabilization of structural elements according to established principles of protein folding. To this end, solvent-exposed side-chains extrinsic to the receptor-binding surface provide convenient sites of modification. An example is provided by an unfavorable helical C-cap (Thr(A8)) whose substitution by favorable amino acids (His(A8) or Arg(A8)) has yielded analogues of improved stability. Remarkably, these analogues also exhibit enhanced activity, suggesting that activity may correlate with stability. Here, we test this hypothesis by substitution of diaminobutyric acid (Dab(A8)), like threonine an amino acid of low helical propensity. The crystal structure of Dab(A8)-insulin is similar to those of native insulin and the related analogue Lys(A8)-insulin. Although no more stable than native insulin, the non-standard analogue is twice as active. Stability and affinity can therefore be uncoupled. To investigate alternative mechanisms by which A8 substitutions enhance activity, multiple substitutions were introduced. Surprisingly, diverse aliphatic, aromatic and polar side-chains enhance receptor binding and biological activity. Because no relationship is observed between activity and helical propensity, we propose that local interactions between the A8 side-chain and an edge of the hormone-receptor interface modulate affinity. Dab(A8)-insulin illustrates the utility of non-standard amino acids in hypothesis-driven protein design.

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Primary Citation of related structures