1IYR image
Deposition Date 2002-09-05
Release Date 2002-09-25
Last Version Date 2023-12-27
Entry Detail
PDB ID:
1IYR
Keywords:
Title:
NMR Structure Ensemble Of Dff-C Domain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
30
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA FRAGMENTATION FACTOR ALPHA SUBUNIT
Gene (Uniprot):DFFA
Chain IDs:A
Chain Length:111
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Solution Structure of the Dff-C Domain of Dff45/Icad. A Structural Basis for the Regulation of Apoptotic DNA Fragmentation
J.Mol.Biol. 321 317 327 (2002)
PMID: 12144788 DOI: 10.1016/S0022-2836(02)00588-0

Abstact

DFF45/ICAD has dual functions in the final stage of apoptosis, by acting as both a folding chaperone and a DNase inhibitor of DFF40/CAD. Here, we present the solution structure of the C-terminal domain of DFF45, which is essential for its chaperone-like activity. The structure of this domain (DFF-C) consists of four alpha helices, which are folded in a novel helix-packing arrangement. The 3D structure reveals a large cluster of negatively charged residues on the molecular surface of DFF-C. This observation suggests that charge complementation plays an important role in the interaction of DFF-C with the positively charged catalytic domain of DFF40, and thus for the chaperone activity of DFF45. The structure of DFF-C also provides a rationale for the loss of the chaperone activity in DFF35, a short isoform of DFF45. Indeed, in DFF35, the amino acid sequence is truncated in the middle of the second alpha helix constituting the structure of DFF-C, and thus both the hydrophobic core and the cluster of negative charges are disrupted.

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