1IF0 image
Deposition Date 2001-04-11
Release Date 2001-05-02
Last Version Date 2024-02-07
Entry Detail
PDB ID:
1IF0
Keywords:
Title:
PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
12.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PROTEIN (MAJOR CAPSID PROTEIN GP5)
Gene (Uniprot):5
Chain IDs:A, B, C, D, E, F, G
Chain Length:256
Number of Molecules:7
Biological Source:Enterobacteria phage HK97
Ligand Molecules
Primary Citation
Virus maturation involving large subunit rotations and local refolding.
Science 292 744 748 (2001)
PMID: 11326105 DOI: 10.1126/science.1058069

Abstact

Large-scale conformational changes transform viral precursors into infectious virions. The structure of bacteriophage HK97 capsid, Head-II, was recently solved by crystallography, revealing a catenated cross-linked topology. We have visualized its precursor, Prohead-II, by cryoelectron microscopy and modeled the conformational change by appropriately adapting Head-II. Rigid-body rotations ( approximately 40 degrees) cause switching to an entirely different set of interactions; in addition, two motifs undergo refolding. These changes stabilize the capsid by increasing the surface area buried at interfaces and bringing the cross-link-forming residues, initially approximately 40 angstroms apart, close together. The inner surface of Prohead-II is negatively charged, suggesting that the transition is triggered electrostatically by DNA packaging.

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Primary Citation of related structures