1HLM image
Deposition Date 1994-08-26
Release Date 1995-02-07
Last Version Date 2024-10-09
Entry Detail
PDB ID:
1HLM
Title:
AMINO ACID SEQUENCE OF A GLOBIN FROM THE SEA CUCUMBER CAUDINA (MOLPADIA) ARENICOLA
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:HEMOGLOBIN (CYANO MET)
Chain IDs:A
Chain Length:159
Number of Molecules:1
Biological Source:Caudina arenicola
Primary Citation
Amino acid sequence of a globin from the sea cucumber Caudina (Molpadia) arenicola.
Biochim.Biophys.Acta 1078 63 67 (1991)
PMID: 2049384 DOI: 10.1016/0167-4838(91)90093-F

Abstact

Coelomic cells from the sea cucumber Caudina (Molpadia) arenicola contain four major globins, A, B, C and D. The hemoglobins from this organism show unusual ligand-linked dissociation properties. The complete amino acid sequence of the D globin has been established. It is N-acetylated, consists of 158 residues and has a 10 amino acid N-terminal extension similar to that found in some other invertebrate globins. The C. arenicola D globin has an equal sequence identity (28%) with both alpha and beta human globins and as anticipated, is more closely related to these vertebrate proteins than are molluscan globins. The C. arenicola D globin shows a 59% identity with the globin I from the sea cucumber Paracaudina chilensis. The availability of the C. arenicola D globin sequence will aid the X-ray analysis of this protein and facilitate an understanding of the changes in subunit interactions that occur with cooperative ligand binding.

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