1HL7 image
Entry Detail
PDB ID:
1HL7
Keywords:
Title:
Gamma lactamase from an Aureobacterium species in complex with 3a,4,7,7a-tetrahydro-benzo [1,3] dioxol-2-one
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2003-03-14
Release Date:
2004-03-30
Method Details:
Experimental Method:
Resolution:
1.73 Å
R-Value Free:
0.16
R-Value Work:
0.15
Space Group:
F 2 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:GAMMA LACTAMASE
Chain IDs:A, B
Chain Length:279
Number of Molecules:2
Biological Source:MICROBACTERIUM SP.
Ligand Molecules
Primary Citation
The Crystal Structure of a (-)Gamma-Lactamase from an Aureobacterium Species Reveals a Tetrahedral Intermediate in the Active Site
J.Mol.Biol. 338 519 ? (2004)
PMID: 15081810 DOI: 10.1016/J.JMB.2004.03.001

Abstact

The structure of the recombinant (-) gamma-lactamase from an Aureobacterium species has been solved at 1.73A resolution in the cubic space group F23 with unit cell parameters a=b=c=240.6A. The trimeric enzyme has an alpha/beta hydrolase fold and closely resembles the cofactor free haloperoxidases. The structure has been solved in complex with a covalently bound ligand originating from the host cell and also in the unligated form. The associated density in the former structure has been interpreted as the two-ring ligand (3aR,7aS)-3a,4,7,7a-tetrahydro-benzo [1,3] dioxol-2-one which forms a tetrahedral complex with OG of the catalytic Ser98. Soaks of these crystals with the industrial substrate gamma-lactam or its structural analogue, norcamphor, result in the displacement of the ligand from the enzyme active site, thereby allowing determination of the unligated structure. The presence of the ligand in the active site protects the enzyme from serine hydrolase inhibitors. Cyclic ethylene carbonate, the first ring of the ligand, was shown to be a substrate of the enzyme.

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Primary Citation of related structures