1HES image
Deposition Date 2000-11-24
Release Date 2001-05-31
Last Version Date 2023-12-13
Entry Detail
PDB ID:
1HES
Title:
MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH P-selectin INTERNALIZATION PEPTIDE SHLGTYGVFTNAA
Biological Source:
Source Organism:
RATTUS NORVEGICUS (Taxon ID: 10116)
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 64
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CLATHRIN COAT ASSEMBLY PROTEIN AP50
Chain IDs:A
Chain Length:285
Number of Molecules:1
Biological Source:RATTUS NORVEGICUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:P-SELECTIN PEPTIDE
Gene (Uniprot):SELP
Chain IDs:B (auth: P)
Chain Length:18
Number of Molecules:1
Biological Source:HOMO SAPIENS
Primary Citation
A Third Specificity-Determining Site in Mu 2 Adaptin for Sequences Upstream of Yxx Phi Sorting Motifs
Traffic 2 105 ? (2001)
PMID: 11247301 DOI: 10.1034/J.1600-0854.2001.020205.X

Abstact

Internalization signals of the Yxx phi type (phi = bulky hydrophobic side chain) interact with the mu 2 chain of AP-2 adaptors. Internalization activity is intolerant of non-conservative substitution of either the tyrosine or the phi side chains, which bind to hydrophobic pockets in mu 2 adaptin in a conformation described as 'a two pinned plug into a socket'. P-selectin, a type I transmembrane protein, contains the Yxx phi-like sequence YGVF in its cytoplasmic domain, but substitution of either the tyrosine or phenylalanine with alanine in the full-length protein causes only small changes in the rate of endocytosis. It is shown here that the sequence YGVF contained within a peptide corresponding to the 17 COOH-terminal amino acids of P-selectin binds to mu 2 adaptin in the same fashion previously seen for other Yxx phi motifs. In addition, the P-selectin peptide binds to a third hydrophobic pocket in mu 2 adaptin through a leucine at position Y-3 in the peptide. This structure suggests that some sequences can function as a 'three pinned plug', in which internalization activity is not critically dependent on any one of the three interacting side chains.

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Primary Citation of related structures
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