1H7Z image
Deposition Date 2001-01-21
Release Date 2001-07-19
Last Version Date 2023-12-13
Entry Detail
PDB ID:
1H7Z
Title:
Adenovirus Ad3 fibre head
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.21
R-Value Work:
0.17
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ADENOVIRUS FIBRE PROTEIN
Gene (Uniprot):L5
Mutations:YES
Chain IDs:A, B, C
Chain Length:194
Number of Molecules:3
Biological Source:HUMAN ADENOVIRUS TYPE 3
Ligand Molecules
Primary Citation
Structure of the Fiber Head of Ad3, a Non-Car-Binding Serotype of Adenovirus
Virology 285 302 ? (2001)
PMID: 11437664 DOI: 10.1006/VIRO.2001.0967

Abstact

Adenoviruses of serotype Ad3 (subgenus B) use a still-unknown host cell receptor for viral attachment, whereas viruses from all other known subgenera use the coxsackie and adenovirus receptor (CAR). The receptor binding domain (head) of the Ad3 fiber protein has been expressed in Escherichia coli inclusion bodies. After denaturation and renaturation using a rapid dilution method, crystals of trimeric head were obtained. The 1.6 A resolution X-ray structure shows a strict conservation of the beta-sheet scaffold of the protein very similar to the head structures of the CAR-binding serotypes Ad2, Ad5, and Ad12. The conformation of the loops is different, with the exception of the AB loop, which forms the center of the interface in the Ad12-CAR complex structure. The structure explains why a mutation in Ad5 of one residue in the AB loop to glutamic acid, as in Ad3, abrogates binding to CAR. It is possible that the Ad3 receptor binding site is nevertheless situated similar to the CAR binding site, although it cannot be excluded that other regions of the relatively hydrophobic head surface may be used.

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Primary Citation of related structures