1GYF image
Deposition Date 1999-04-30
Release Date 2000-01-05
Last Version Date 2023-12-27
Entry Detail
PDB ID:
1GYF
Keywords:
Title:
GYF DOMAIN FROM HUMAN CD2BP2 PROTEIN
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
30
Conformers Submitted:
16
Selection Criteria:
LEAST RESTRAINT VIOLATIONS, LEAST ENERGY FUNCTION
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PROTEIN (CYTOPLASMIC DOMAIN BINDING PROTEIN (CD2BP2))
Gene (Uniprot):CD2BP2
Chain IDs:A
Chain Length:62
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The GYF domain is a novel structural fold that is involved in lymphoid signaling through proline-rich sequences.
Nat.Struct.Biol. 6 656 660 (1999)
PMID: 10404223 DOI: 10.1038/10712

Abstact

T cell activation through the CD2 cell surface receptor is transmitted by proline-rich sequences within its cytoplasmic tail. A membrane-proximal proline-rich tandem repeat, involved in cytokine production, is recognized by the intracellular CD2 binding protein CD2BP2. We solved the solution structure of the CD2 binding domain of CD2BP2, which we name the glycine-tyrosine-phenylalanine (GYF) domain. The GYF sequence is part of a structurally unique bulge-helix-bulge motif that constitutes the major binding site for the CD2 tail. A hydrophobic surface patch is created by motif residues that are highly conserved among a variety of proteins from diverse eukaryotic species. Thus, the architecture of the GYF domain may be widely used in protein-protein associations.

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Primary Citation of related structures