1GX8 image
Deposition Date 2002-03-29
Release Date 2002-06-13
Last Version Date 2023-12-13
Entry Detail
PDB ID:
1GX8
Keywords:
Title:
BOVINE BETA-LACTOGLOBULIN COMPLEXED WITH RETINOL, TRIGONAL LATTICE Z
Biological Source:
Source Organism:
BOS TAURUS (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.30
R-Value Observed:
0.21
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:BETA-LACTOGLOBULIN
Gene (Uniprot):LGB
Chain IDs:A
Chain Length:162
Number of Molecules:1
Biological Source:BOS TAURUS
Ligand Molecules
Primary Citation
The Ligand-Binding Site of Bovine Beta-Lactoglobulin: Evidence for a Function?
J.Mol.Biol. 318 1043 ? (2002)
PMID: 12054801 DOI: 10.1016/S0022-2836(02)00017-7

Abstact

Ever since the fortuitous observation that beta-lactoglobulin (beta-Lg), the major whey protein in the milk of ruminants, bound retinol, the details of the binding have been controversial. beta-Lg is a lipocalin, like plasma retinol-binding protein, so that ligand association was expected to make use of the central cavity in the protein. However, an early crystallographic analysis and some of the more recent solution studies indicated binding elsewhere. We have now determined the crystal structures of the complexes of the trigonal form of beta-Lg at pH 7.5 with bound retinol (R=21.4% for 7329 reflections between 20 and 2.4 A resolution, R(free)=30.6%) and with bound retinoic acid (R=22.7% for 7813 reflections between 20 and 2.34 A resolution, R(free)=29.8%). Both ligands are found to occupy the central calyx in a manner similar to retinol binding in retinol-binding protein. We find no evidence of binding at the putative external binding site in either of these structural analyses. Further, competition between palmitic acid and retinol reveals only palmitate bound to the protein. An explanation is provided for the lack of ligand binding to the orthorhombic crystal form also obtained at pH 7.5. Finally, the possible function of beta-Lg is discussed in the light of its species distribution and similarity to other lipocalins.

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Primary Citation of related structures