1GNF image
Deposition Date 1998-10-12
Release Date 1999-06-08
Last Version Date 2024-05-01
Entry Detail
PDB ID:
1GNF
Title:
SOLUTION STRUCTURE OF THE N-TERMINAL ZINC FINGER OF MURINE GATA-1, NMR, 25 STRUCTURES
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Method Details:
Experimental Method:
Conformers Calculated:
1000
Conformers Submitted:
25
Selection Criteria:
LOWEST RESIDUAL RESTRAINT VIOLATIONS
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TRANSCRIPTION FACTOR GATA-1
Gene (Uniprot):Gata1
Chain IDs:A
Chain Length:46
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
The solution structure of the N-terminal zinc finger of GATA-1 reveals a specific binding face for the transcriptional co-factor FOG.
J.Biomol.NMR 13 249 262 (1999)
PMID: 10212985 DOI: 10.1023/A:1008309602929

Abstact

Zinc fingers (ZnFs) are generally regarded as DNA-binding motifs. However, a number of recent reports have implicated particular ZnFs in the mediation of protein-protein interactions. The N-terminal ZnF of GATA-1 (NF) is one such finger, having been shown to interact with a number of other proteins, including the recently discovered transcriptional co-factor FOG. Here we solve the three-dimensional structure of the NF in solution using multidimensional 1H/15N NMR spectroscopy, and we use 1H/15N spin relaxation measurements to investigate its backbone dynamics. The structure consists of two distorted beta-hairpins and a single alpha-helix, and is similar to that of the C-terminal ZnF of chicken GATA-1. Comparisons of the NF structure with those of other C4-type zinc binding motifs, including hormone receptor and LIM domains, also reveal substantial structural homology. Finally, we use the structure to map the spatial locations of NF residues shown by mutagenesis to be essential for FOG binding, and demonstrate that these residues all lie on a single face of the NF. Notably, this face is well removed from the putative DNA-binding face of the NF, an observation which is suggestive of simultaneous roles for the NF; that is, stabilisation of GATA-1 DNA complexes and recruitment of FOG to GATA-1-controlled promoter regions.

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