1GJG image
Deposition Date 2001-05-11
Release Date 2001-05-30
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1GJG
Keywords:
Title:
Peptide Antagonist of IGFBP1, (i,i+8) Covalently Restrained Analog, Minimized Average Structure
Biological Source:
Source Organism:
(Taxon ID: )
Method Details:
Experimental Method:
Conformers Submitted:
1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:IGFBP-1 antagonist
Chain IDs:A
Chain Length:14
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
Structure-function analysis of a phage display-derived peptide that binds to insulin-like growth factor binding protein 1.
Biochemistry 40 8487 8498 (2001)
PMID: 11456486 DOI: 10.1021/bi0103866

Abstact

Highly structured, peptide antagonists of the interaction between insulin-like growth factor 1 (IGF-I) and IGF binding protein 1 (IGFBP-1) have recently been discovered by phage display of naïve peptide libraries [Lowman, H. B., et al. (1998) Biochemistry 37, 8870--8878]. We now report a detailed analysis of the features of this turn-helix peptide motif that are necessary for IGFBP-1 binding and structural integrity. Further rounds of phage randomization indicate the importance of residues contributing to a hydrophobic patch on one face of the helix. Alanine-scanning substitutions confirm that the hydrophobic residues are necessary for binding. However, structural analysis by NMR spectroscopy indicates that some of these analogues are less well folded. Structured, high-affinity analogues that lack the disulfide bond were prepared by introducing a covalent constraint between side chains at positions i and i + 7 or i + 8 within the helix. Analogues based on this scaffold demonstrate that a helical conformation is present in the bound state, and that hydrophobic side chains in this helix, and residues immediately preceding it, interact with IGFBP-1. By comparison of alanine scanning data for IGF-I and the turn-helix peptide, we propose a model for common surface features of these molecules that recognize IGFBP-1.

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