1GD6 image
Deposition Date 2000-09-19
Release Date 2001-03-21
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1GD6
Keywords:
Title:
STRUCTURE OF THE BOMBYX MORI LYSOZYME
Biological Source:
Source Organism:
Bombyx mori (Taxon ID: 7091)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.22
R-Value Work:
0.18
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:LYSOZYME
Chain IDs:A
Chain Length:119
Number of Molecules:1
Biological Source:Bombyx mori
Primary Citation
Structural analysis of an insect lysozyme exhibiting catalytic efficiency at low temperatures.
Biochemistry 41 12086 12092 (2002)
PMID: 12356308 DOI: 10.1021/bi016099j

Abstact

Bombyx mori lysozyme (BmLZ), from the silkworm, is an insect lysozyme. BmLZ has considerable activity at low temperatures and low activation energies compared with those of hen egg white lysozyme (HEWLZ), according to measurements of the temperature dependencies of relative activity (lytic and glycol chitin) and the estimation of activation energies using the Arrhenius equation. Being so active at low temperatures and low activation energies is characteristic of psychrophilic (cold-adapted) enzymes. The three-dimensional structure of BmLZ has been determined by X-ray crystallography at 2.5 A resolution. The core structure of BmLZ is similar to that of c-type lysozymes. However, BmLZ shows some distinct differences in the two exposed loops and the C-terminal region. A detailed comparison of BmLZ and HEWLZ suggests structural rationalizations for the differences in the catalytic efficiency, stability, and mode of activity between these two lysozymes.

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