1GCP image
Deposition Date 2000-08-08
Release Date 2001-08-08
Last Version Date 2023-10-25
Entry Detail
PDB ID:
1GCP
Title:
CRYSTAL STRUCTURE OF VAV SH3 DOMAIN
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:VAV PROTO-ONCOGENE
Gene (Uniprot):Vav1
Chain IDs:A, B, C, D
Chain Length:70
Number of Molecules:4
Biological Source:Mus musculus
Primary Citation
Novel recognition mode between Vav and Grb2 SH3 domains.
EMBO J. 20 2995 3007 (2001)
PMID: 11406576 DOI: 10.1093/emboj/20.12.2995

Abstact

Vav is a guanine nucleotide exchange factor for the Rho/Rac family that is expressed exclusively in hematopoietic cells. Growth factor receptor-bound protein 2 (Grb2) has been proposed to play important roles in the membrane localization and activation of Vav through dimerization of its C-terminal Src-homology 3 (SH3) domain (GrbS) and the N-terminal SH3 domain of Vav (VavS). The crystal structure of VavS complexed with GrbS has been solved. VavS is distinct from other SH3 domain proteins in that its binding site for proline-rich peptides is blocked by its own RT loop. One of the ends of the VavS beta-barrel forms a concave hydrophobic surface. The GrbS components make a contiguous complementary interface with the VavS surface. The binding site of GrbS for VavS partially overlaps with the canonical binding site for proline-rich peptides, but is definitely different. Mutations at the interface caused a decrease in the binding affinity of VavS for GrbS by 4- to 40-fold. The structure reveals how GrbS discriminates VavS specifically from other signaling molecules without binding to the proline-rich motif.

Legend

Protein

Chemical

Disease

Primary Citation of related structures