1FZK image
Entry Detail
PDB ID:
1FZK
Keywords:
Title:
MHC CLASS I NATURAL MUTANT H-2KBM1 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND SENDAI VIRUS NUCLEOPROTEIN
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2000-10-03
Release Date:
2001-03-28
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.21
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN
Mutations:A152E, Y155R, Y156L
Chain IDs:A
Chain Length:274
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:PROTEIN (BETA-2-MICROGLOBULIN)
Chain IDs:B
Chain Length:99
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:PROTEIN (NUCLEOCAPSID PROTEIN)
Chain IDs:C (auth: P)
Chain Length:9
Number of Molecules:1
Biological Source:
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
CSO A CYS S-HYDROXYCYSTEINE
Primary Citation
The crystal structures of K(bm1) and K(bm8) reveal that subtle changes in the peptide environment impact thermostability and alloreactivity.
Immunity 14 231 242 (2001)
PMID: 11290333 DOI: 10.1016/S1074-7613(01)00105-4

Abstact

The K(bm1) and K(bm8) natural mutants of the murine MHC class I molecule H-2K(b) were originally identified by allograft rejection. They also bind viral peptides VSV8 and SEV9 with high affinity, but their peptide complexes have substantially decreased thermostability, and the K(bm1) complexes do not elicit alloreactive T cell responses. Crystal structures of the four mutant complexes at 1.7-1.9 A resolution are similar to the corresponding wild-type K(b) structures, except in the vicinity of the mutated residues, which alter the electrostatic potential, topology, hydrogen bonding, and local water structure of the peptide binding groove. Thus, these natural K(b) mutations define the minimal perturbations in the peptide environment that alter antigen presentation to T cells and abolish alloreactivity.

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Primary Citation of related structures