1FVU image
Deposition Date 2000-09-20
Release Date 2001-02-14
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1FVU
Keywords:
Title:
CRYSTAL STRUCTURE OF BOTROCETIN
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:BOTROCETIN ALPHA CHAIN
Chain IDs:A, C
Chain Length:133
Number of Molecules:2
Biological Source:Bothrops jararaca
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:BOTROCETIN BETA CHAIN
Chain IDs:B, D
Chain Length:125
Number of Molecules:2
Biological Source:Bothrops jararaca
Ligand Molecules
Primary Citation
Crystal structure of the von Willebrand factor modulator botrocetin.
Biochemistry 40 345 352 (2001)
PMID: 11148028 DOI: 10.1021/bi0021737

Abstact

The binding of von Willebrand factor (vWF) to the platelet receptor, glycoprotein (GP) Ib-IX-V complex, has a key role in the initiation of thrombus formation and is regulated by interactions with extracellular matrix components under the influence of hemodynamic forces. To a certain extent, these effects can be mimicked in vitro by two nonphysiologic modulators, ristocetin and botrocetin. The latter, isolated from the venom of the snake Bothrops jararaca, is a 31-kDa heterodimeric protein that forms a soluble complex with vWF. As an initial step toward understanding the mechanisms that regulate vWF function, we have solved the crystal structure of botrocetin at 1.8 A resolution. Botrocetin exhibits homology with other snake proteins, but contains only one metal binding site as compared to two in Factor IX binding protein and Factor IX/X binding protein and none in flavocetin. A distinctive feature of botrocetin is the presence of a negatively charged surface that may play a role in the association with the vWF A1 domain.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback