1FQQ image
Deposition Date 2000-09-06
Release Date 2001-04-11
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1FQQ
Keywords:
Title:
SOLUTION STRUCTURE OF HUMAN BETA-DEFENSIN-2
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest target function value
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:BETA-DEFENSIN-2
Gene (Uniprot):DEFB4A, DEFB4B
Chain IDs:A
Chain Length:41
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The NMR structure of human beta-defensin-2 reveals a novel alpha-helical segment.
Biochemistry 40 3810 3816 (2001)
PMID: 11300761 DOI: 10.1021/bi002519d

Abstact

Human beta-defensin-2 (HBD-2) is a member of the defensin family of antimicrobial peptides. HBD-2 was first isolated from inflamed skin where it is posited to participate in the killing of invasive bacteria and in the recruitment of cells of the adaptive immune response. Static light scattering and two-dimensional proton nuclear magnetic resonance spectroscopy have been used to assess the physical state and structure of HBD-2 in solution. At concentrations of < or = 2.4 mM, HBD-2 is monomeric. The structure is amphiphilic with a nonuniform surface distribution of positive charge and contains several key structural elements, including a triple-stranded, antiparallel beta-sheet with strands 2 and 3 in a beta-hairpin conformation. A beta-bulge in the second strand occurs at Gly28, a position conserved in the entire defensin family. In solution, HBD-2 exhibits an alpha-helical segment near the N-terminus that has not been previously ascribed to solution structures of alpha-defensins or to the beta-defensin BNBD-12. This novel structural element may be a factor contributing to the specific microbicidal or chemokine-like properties of HBD-2.

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Chemical

Disease

Primary Citation of related structures
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