1FPT image
Deposition Date 1995-01-26
Release Date 1995-03-31
Last Version Date 2024-10-23
Entry Detail
PDB ID:
1FPT
Title:
THREE-DIMENSIONAL STRUCTURE OF THE COMPLEX BETWEEN THE FAB FRAGMENT OF AN NEUTRALIZING ANTIBODY FOR TYPE 1 POLIOVIRUS AND ITS VIRAL EPITOPE
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 63 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:IGG2A-KAPPA C3 FAB (HEAVY CHAIN)
Gene (Uniprot):Ighg2a
Chain IDs:C (auth: H)
Chain Length:220
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:IGG2A-KAPPA C3 FAB (LIGHT CHAIN)
Chain IDs:B (auth: L)
Chain Length:219
Number of Molecules:1
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FAB FRAGMENT OF AN NEUTRALIZING ANTIBODY FOR TYPE 1 POLIOVIRUS
Chain IDs:A (auth: P)
Chain Length:18
Number of Molecules:1
Biological Source:Human poliovirus 1
Primary Citation
Structure of the complex between the Fab fragment of a neutralizing antibody for type 1 poliovirus and its viral epitope.
Nat.Struct.Biol. 2 232 243 (1995)
PMID: 7539711 DOI: 10.1038/nsb0395-232

Abstact

The crystal structure of the complex between the Fab fragment of C3, a neutralizing antibody for poliovirus, and a peptide corresponding to the viral epitope has been determined at 3.0 A resolution. Although this antibody was originally raised to heat inactivated (noninfectious) virus particles, it strongly neutralizes the Mahoney strain of type 1 poliovirus. Eleven peptide residues are well-defined in the electron-density map and form two type I beta-turns in series. At the carboxyl end, the peptide is bound snugly in the antibody-combining site and adopts a conformation that differs significantly from the structure of the corresponding residues in the virus. Structural comparisons between the peptide in the complex and the viral epitope suggests that on binding to infectious virions, this antibody may induce structural changes important for neutralization.

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