1FOQ image
Deposition Date 2000-08-28
Release Date 2000-12-22
Last Version Date 2025-03-05
Entry Detail
PDB ID:
1FOQ
Keywords:
Title:
PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
20.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:BACTERIOPHAGE PHI29 PROHEAD RNA
Mutations:BASES 5, 18-20, 106, 109 AND 118-120 ARE NOT IN THE MODEL
Chain IDs:A, B, C, D, E
Chain Length:120
Number of Molecules:5
Biological Source:Bacillus phage phi29
Ligand Molecules
Primary Citation
Structure of the bacteriophage phi29 DNA packaging motor.
Nature 408 745 750 (2000)
PMID: 11130079 DOI: 10.1038/35047129

Abstact

Motors generating mechanical force, powered by the hydrolysis of ATP, translocate double-stranded DNA into preformed capsids (proheads) of bacterial viruses and certain animal viruses. Here we describe the motor that packages the double-stranded DNA of the Bacillus subtilis bacteriophage phi29 into a precursor capsid. We determined the structure of the head-tail connector--the central component of the phi29 DNA packaging motor--to 3.2 A resolution by means of X-ray crystallography. We then fitted the connector into the electron densities of the prohead and of the partially packaged prohead as determined using cryo-electron microscopy and image reconstruction analysis. Our results suggest that the prohead plus dodecameric connector, prohead RNA, viral ATPase and DNA comprise a rotary motor with the head-prohead RNA-ATPase complex acting as a stator, the DNA acting as a spindle, and the connector as a ball-race. The helical nature of the DNA converts the rotary action of the connector into translation of the DNA.

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Primary Citation of related structures