1FOD image
Deposition Date 1993-10-27
Release Date 1994-01-31
Last Version Date 2024-02-07
Entry Detail
PDB ID:
1FOD
Keywords:
Title:
STRUCTURE OF A MAJOR IMMUNOGENIC SITE ON FOOT-AND-MOUTH DISEASE VIRUS
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
I 2 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FOOT AND MOUTH DISEASE VIRUS
Chain IDs:A (auth: 1)
Chain Length:213
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Polymer Type:polypeptide(L)
Molecule:FOOT AND MOUTH DISEASE VIRUS
Chain IDs:B (auth: 2)
Chain Length:218
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Polymer Type:polypeptide(L)
Molecule:FOOT AND MOUTH DISEASE VIRUS
Chain IDs:C (auth: 3)
Chain Length:220
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Polymer Type:polypeptide(L)
Molecule:FOOT AND MOUTH DISEASE VIRUS
Chain IDs:D (auth: 4)
Chain Length:85
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Ligand Molecules
Primary Citation

Abstact

Attachment of foot-and-mouth disease virus (FMDV) to its cellular receptor involves a long and highly antigenic loop containing the conserved sequence, Arg-Gly-Asp, a motif known to be a recognition element in many integrin-dependent cell adhesion processes. In our original crystal structure of FMDV the Arg-Gly-Asp-containing loop ('the loop'), located between beta-strands G and H of capsid protein VP1, was disordered and hence essentially invisible. We previously surmised that its disorder is enhanced by a disulphide bond linking the base of the loop (Cys 134) to Cys 130 of VP2 (ref. 8). We report here the crystal structure of the virus in which this disulphide is reduced. Reduced virus retains infectivity and serological experiments suggest that some of the loop's internal structure is conserved. But here its structure has become sufficiently ordered to allow us to describe an unambiguous conformation, which we relate to some key biological properties of the virus.

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Protein

Chemical

Disease

Primary Citation of related structures