1FNS image
Deposition Date 2000-08-23
Release Date 2000-10-18
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1FNS
Keywords:
Title:
CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR (VWF) A1 DOMAIN I546V MUTANT IN COMPLEX WITH THE FUNCTION BLOCKING FAB NMC4
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:VON WILLEBRAND FACTOR
Gene (Uniprot):VWF
Chain IDs:C (auth: A)
Chain Length:196
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:IMMUNOGLOBULIN NMC-4 IGG1
Chain IDs:B (auth: H)
Chain Length:225
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:IMMUNOGLOBULIN NMC-4 IGG1
Chain IDs:A (auth: L)
Chain Length:214
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
von Willebrand factor conformation and adhesive function is modulated by an internalized water molecule.
Nat.Struct.Biol. 7 881 884 (2000)
PMID: 11017197 DOI: 10.1038/79639

Abstact

Platelet participation in hemostasis and arterial thrombosis requires the binding of glycoprotein (GP) Ibalpha to von Willebrand factor (vWF). Hemodynamic forces enhance this interaction, an effect mimicked by the substitution I546V in the vWF A1 domain. A water molecule becomes internalized near the deleted Ile methyl group. The change in hydrophobicity of the local environment causes positional changes propagated over a distance of 27 A. As a consequence, a major reorientation of a peptide plane occurs in a surface loop involved in GP Ibalpha binding. This distinct vWF conformation shows increased platelet adhesion and provides a structural model for the initial regulation of thrombus formation.

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