1FI2 image
Deposition Date 2000-08-03
Release Date 2001-05-01
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1FI2
Keywords:
Title:
CRYSTAL STRUCTURE OF GERMIN (OXALATE OXIDASE)
Biological Source:
Source Organism:
Hordeum vulgare (Taxon ID: 4513)
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.23
R-Value Work:
0.19
Space Group:
H 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:OXALATE OXIDASE
Chain IDs:A
Chain Length:201
Number of Molecules:1
Biological Source:Hordeum vulgare
Ligand Molecules
Primary Citation
Germin is a manganese containing homohexamer with oxalate oxidase and superoxide dismutase activities.
Nat.Struct.Biol. 7 1036 1040 (2000)
PMID: 11062559 DOI: 10.1038/80954

Abstact

Germin is a hydrogen peroxide generating oxalate oxidase with extreme thermal stability; it is involved in the defense against biotic and abiotic stress in plants. The structure, determined at 1.6 A resolution, comprises beta-jellyroll monomers locked into a homohexamer (a trimer of dimers), with extensive surface burial accounting for its remarkable stability. The germin dimer is structurally equivalent to the monomer of the 7S seed storage proteins (vicilins), indicating evolution from a common ancestral protein. A single manganese ion is bound per germin monomer by ligands similar to those of manganese superoxide dismutase (MnSOD). Germin is also shown to have SOD activity and we propose that the defense against extracellular superoxide radicals is an important additional role for germin and related proteins.

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Primary Citation of related structures