1FI0 image
Deposition Date 2000-08-03
Release Date 2001-02-28
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1FI0
Keywords:
Title:
SOLUTION STRUCTURE OF HIV-1 VPR (13-33) PEPTIDE IN MICELLS
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
160
Conformers Submitted:
22
Selection Criteria:
structures with the least restraint violations, structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:VPR PROTEIN
Gene (Uniprot):vpr
Chain IDs:A
Chain Length:22
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
Solution structure of human immunodeficiency virus type 1 Vpr(13-33) peptide in micelles.
Eur.J.Biochem. 268 389 395 (2001)
PMID: 11168374 DOI: 10.1046/j.1432-1033.2001.01895.x

Abstact

Human immunodeficiency virus type 1 protein R (HIV-1 Vpr) promotes nuclear entry of viral nucleic acids in nondividing cells, causes G2 cell cycle arrest and is involved in cellular differentiation and cell death. Also, Vpr subcellular localization is as variable as its functions. It is known that, consistent with its role in nuclear transport, Vpr localizes to the nuclear envelope of human cells. Further, a reported ion channel activity of Vpr obviously is dependent on its localization in or at membranes. We focused our structural studies on the secondary structure of a peptide consisting of residues 13-33 of HIV-1 Vpr in micelles. Employing nuclear magnetic resonance and circular dichroism spectroscopy we found this part of Vpr, known to be essential for nuclear localization, to be almost completely alpha helical. Our results provide structural data suggesting residues 13-33 of Vpr to form an amphipathic, leucine-zipper-like alpha helix that serves as a basis for interactions with a variety of viral and cellular factors.

Legend

Protein

Chemical

Disease

Primary Citation of related structures