1FAF image
Deposition Date 2000-07-13
Release Date 2000-11-22
Last Version Date 2024-05-22
Entry Detail
PDB ID:
1FAF
Keywords:
Title:
NMR STRUCTURE OF THE N-TERMINAL J DOMAIN OF MURINE POLYOMAVIRUS T ANTIGENS.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
47
Selection Criteria:
STRUCTURES WITH FAVORABLE NON-BOND ENERGY,STRUCTURES WITH THE LOWEST ENERGY
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:LARGE T ANTIGEN
Chain IDs:A
Chain Length:79
Number of Molecules:1
Biological Source:Murine polyomavirus
Ligand Molecules
Primary Citation
NMR structure of the N-terminal J domain of murine polyomavirus T antigens. Implications for DnaJ-like domains and for mutations of T antigens.
J.Biol.Chem. 275 36094 36103 (2000)
PMID: 10950962 DOI: 10.1074/jbc.M006572200

Abstact

The NMR structure of the N-terminal, DnaJ-like domain of murine polyomavirus tumor antigens (PyJ) has been determined to high precision, with root mean square deviations to the mean structure of 0.38 A for backbone atoms and 0.94 A for all heavy atoms of ordered residues 5-41 and 50-69. PyJ possesses a three-helix fold, in which anti-parallel helices II and III are bridged by helix I, similar to the four-helix fold of the J domains of DnaJ and human DnaJ-1. PyJ differs significantly in the lengths of N terminus, helix I, and helix III. The universally conserved HPD motif appears to form a His-Pro C-cap of helix II. Helix I features a stabilizing Schellman C-cap that is probably conserved universally among J domains. On the helix II surface where positive charges of other J domains have been implicated in binding of hsp70s, PyJ contains glutamine residues. Nonetheless, chimeras that replace the J domain of DnaJ with PyJ function like wild-type DnaJ in promoting growth of Escherichia coli. This activity can be modulated by mutations of at least one of these glutamines. T antigen mutations reported to impair cellular transformation by the virus, presumably via interactions with PP2A, cluster in the hydrophobic folding core and at the extreme N terminus, remote from the HPD loop.

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Primary Citation of related structures