1F5Q image
Deposition Date 2000-06-15
Release Date 2000-12-27
Last Version Date 2024-02-07
Entry Detail
PDB ID:
1F5Q
Keywords:
Title:
CRYSTAL STRUCTURE OF MURINE GAMMA HERPESVIRUS CYCLIN COMPLEXED TO HUMAN CYCLIN DEPENDENT KINASE 2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CYCLIN DEPENDENT KINASE 2
Gene (Uniprot):CDK2
Chain IDs:A, C
Chain Length:298
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:GAMMA HERPESVIRUS CYCLIN
Gene (Uniprot):v-cyclin
Chain IDs:B, D
Chain Length:252
Number of Molecules:2
Biological Source:Murid herpesvirus 4
Ligand Molecules
Primary Citation
Crystal structure of a gamma-herpesvirus cyclin-cdk complex.
EMBO J. 19 2877 2888 (2000)
PMID: 10856233 DOI: 10.1093/emboj/19.12.2877

Abstact

Several gamma-herpesviruses encode proteins related to the mammalian cyclins, regulatory subunits of cyclin-dependent kinases (cdks) essential for cell cycle progression. We report a 2.5 A crystal structure of a full-length oncogenic viral cyclin from gamma-herpesvirus 68 complexed with cdk2. The viral cyclin binds cdk2 with an orientation different from cyclin A and makes several novel interactions at the interface, yet it activates cdk2 by triggering conformational changes similar to cyclin A. Sequences within the viral cyclin N-terminus lock part of the cdk2 T-loop within the core of the complex. These sequences and others are conserved amongst the viral and cellular D-type cyclins, suggesting that this structure has wider implications for other cyclin-cdk complexes. The observed resistance of this viral cyclin-cdk complex to inhibition by the p27(KIP:) cdk inhibitor is explained by sequence and conformational variation in the cyclin rendering the p27(KIP:)-binding site on the cyclin subunit non-functional.

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Primary Citation of related structures