1EZX image
Deposition Date 2000-05-12
Release Date 2000-10-25
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1EZX
Title:
CRYSTAL STRUCTURE OF A SERPIN:PROTEASE COMPLEX
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Bos taurus (Taxon ID: 9913)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.23
R-Value Work:
0.20
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ALPHA-1-ANTITRYPSIN
Gene (Uniprot):SERPINA1
Chain IDs:A
Chain Length:335
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:ALPHA-1-ANTITRYPSIN
Gene (Uniprot):SERPINA1
Chain IDs:B
Chain Length:36
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:TRYPSIN
Gene (Uniprot):PRSS1
Chain IDs:C
Chain Length:243
Number of Molecules:1
Biological Source:Bos taurus
Primary Citation
Structure of a serpin-protease complex shows inhibition by deformation.
Nature 407 923 926 (2000)
PMID: 11057674 DOI: 10.1038/35038119

Abstact

The serpins have evolved to be the predominant family of serine-protease inhibitors in man. Their unique mechanism of inhibition involves a profound change in conformation, although the nature and significance of this change has been controversial. Here we report the crystallographic structure of a typical serpin-protease complex and show the mechanism of inhibition. The conformational change is initiated by reaction of the active serine of the protease with the reactive centre of the serpin. This cleaves the reactive centre, which then moves 71 A to the opposite pole of the serpin, taking the tethered protease with it. The tight linkage of the two molecules and resulting overlap of their structures does not affect the hyperstable serpin, but causes a surprising 37% loss of structure in the protease. This is induced by the plucking of the serine from its active site, together with breakage of interactions formed during zymogen activation. The disruption of the catalytic site prevents the release of the protease from the complex, and the structural disorder allows its proteolytic destruction. It is this ability of the conformational mechanism to crush as well as inhibit proteases that provides the serpins with their selective advantage.

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Primary Citation of related structures