1EXZ image
Deposition Date 2000-05-05
Release Date 2000-07-06
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1EXZ
Title:
STRUCTURE OF STEM CELL FACTOR
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.29
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:STEM CELL FACTOR
Gene (Uniprot):KITLG
Chain IDs:A, B, C, D
Chain Length:141
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Crystal structure of human stem cell factor: implication for stem cell factor receptor dimerization and activation.
Proc.Natl.Acad.Sci.USA 97 7732 7737 (2000)
PMID: 10884405 DOI: 10.1073/pnas.97.14.7732

Abstact

Stem cell factor (SCF) plays important roles in hematopoiesis and the survival, proliferation, and differentiation of mast cells, melanocytes, and germ cells. SCF mediates its biological effects by binding to and activating a receptor tyrosine kinase designated c-kit or SCF receptor. In this report we describe the 2.3-A crystal structure of the functional core of recombinant human SCF. SCF is a noncovalent homodimer composed of two slightly wedged protomers. Each SCF protomer exhibits an antiparallel four-helix bundle fold. Dimerization is mediated by extensive polar and nonpolar interactions between the two protomers with a large buried surface area. Finally, we have identified a hydrophobic crevice and a charged region at the tail of each protomer that functions as a potential receptor-binding site. On the basis of these observations, a model for SCF small middle dotc-kit complex formation and dimerization is proposed.

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Primary Citation of related structures
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