1EQQ image
Deposition Date 2000-04-06
Release Date 2003-09-23
Last Version Date 2024-02-07
Entry Detail
PDB ID:
1EQQ
Keywords:
Title:
SINGLE STRANDED DNA BINDING PROTEIN AND SSDNA COMPLEX
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.33
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SINGLE STRANDED DNA BINDING PROTEIN
Chain IDs:C (auth: A), D (auth: B), E (auth: C), F (auth: D)
Chain Length:178
Number of Molecules:4
Biological Source:Escherichia coli
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
5MU A U 5-METHYLURIDINE 5'-MONOPHOSPHATE
Primary Citation
Roles of functional loops and the C-terminal segment of a single-stranded DNA binding protein elucidated by X-Ray structure analysis
J.Biochem.(Tokyo) 127 329 335 (2000)
PMID: 10731701

Abstact

The single-stranded DNA (ssDNA) binding protein from Escherichia coli (EcoSSB) plays a central role in DNA replication, recombination and repair. The tertiary structure of EcoSSB was determined at 2.2 A resolution. This is rather higher resolution than previously reported. Crystals were grown from the homogeneous intact protein but the EcoSSB tetramer in the crystals contains truncated subunits lacking a part of the C-terminal. The structure determined includes biologically important flexible loops and C-terminal regions, and revealed the existence of concavities. These concavities include the residues important for ssDNA binding. An ssDNA can be fitted on the concavities and further stabilized through interactions with the loops forming flexible lids. It seems likely to play a central role in the binding of ssDNA.

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Primary Citation of related structures