1EQ1 image
Deposition Date 2000-03-31
Release Date 2002-02-13
Last Version Date 2024-05-22
Entry Detail
PDB ID:
1EQ1
Title:
NMR STRUCTURE OF AN EXCHANGEABLE APOLIPOPROTEIN-MANDUCA SEXTA APOLIPOPHORIN-III
Biological Source:
Source Organism:
Manduca sexta (Taxon ID: 7130)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
40
Conformers Submitted:
25
Selection Criteria:
structures with acceptable covalent geometry, structures with favorable non-bond energy, structures with the least restraint violations, structures with the lowest energy, target function
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:APOLIPOPHORIN-III
Chain IDs:A
Chain Length:166
Number of Molecules:1
Biological Source:Manduca sexta
Primary Citation
Structural basis for the conformational adaptability of apolipophorin III, a helix-bundle exchangeable apolipoprotein
Proc.Natl.Acad.Sci.USA 99 1188 1193 (2002)
PMID: 11818551 DOI: 10.1073/pnas.032565999

Abstact

The high-resolution NMR structure of apolipophorin III from the sphinx moth, Manduca sexta, has been determined in the lipid-free state. We show that lipid-free apolipophorin III adopts a unique helix-bundle topology that has several characteristic structural features. These include a marginally stable, up-and-down helix bundle that allows for concerted opening of the bundle about "hinged" loops upon lipid interaction and buried polar/ionizable residues and buried interhelical H-bonds located in the otherwise hydrophobic interior of the bundle that adjust protein stability and facilitate lipid-induced conformational opening. We suggest that these structural features modulate the conformational adaptability of the lipid-free helix bundle upon lipid binding and control return of the open conformation to the original lipid-free helix-bundle state. Taken together, these data provide a structural rationale for the ability of exchangeable apolipoproteins to reversibly interact with circulating lipoprotein particles.

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