1EO8 image
Deposition Date 2000-03-22
Release Date 2000-04-12
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1EO8
Title:
INFLUENZA VIRUS HEMAGGLUTININ COMPLEXED WITH A NEUTRALIZING ANTIBODY
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.29
R-Value Work:
0.19
Space Group:
P 3 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:HEMAGGLUTININ (HA1 CHAIN)
Gene (Uniprot):HA
Chain IDs:A
Chain Length:328
Number of Molecules:1
Biological Source:Influenza A virus (A/X-31(H3N2))
Polymer Type:polypeptide(L)
Molecule:HEMAGGLUTININ (HA2 CHAIN)
Gene (Uniprot):HA
Chain IDs:B
Chain Length:175
Number of Molecules:1
Biological Source:Influenza A virus (A/X-31(H3N2))
Polymer Type:polypeptide(L)
Molecule:ANTIBODY (HEAVY CHAIN)
Chain IDs:D (auth: H)
Chain Length:217
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:ANTIBODY (LIGHT CHAIN)
Chain IDs:C (auth: L)
Chain Length:210
Number of Molecules:1
Biological Source:Mus musculus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Structural evidence for recognition of a single epitope by two distinct antibodies.
Proteins 40 572 578 (2000)
PMID: 10899782 DOI: 10.1002/1097-0134(20000901)40:4<572::AID-PROT30>3.3.CO;2-E

Abstact

The structure of a complex between the hemagglutinin of influenza virus and the Fab of a neutralizing antibody was determined by X-ray crystallography at 2.8 A resolution. This antibody and another which has only 56% sequence identity bind to the same epitope with very similar affinities and in the same orientation. One third of the interactions is conserved in the two complexes; a significant proportion of the interactions that differ are established by residues of the H3 complementarity-determining regions (CDR) which adopt distinct conformations in the two antibodies. This demonstrates that there is a definite flexibility in the selection of antibodies that bind to a given epitope, despite the high affinity of their complexes. This flexibility allows the humoral immune response to be redundant, a feature that may be useful in achieving longer lasting protection against evolving viral pathogens.

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Disease

Primary Citation of related structures