1EL0 image
Deposition Date 2000-03-11
Release Date 2000-09-01
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1EL0
Keywords:
Title:
SOLUTION STRUCTURE OF THE HUMAN CC CHEMOKINE, I-309
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
30
Selection Criteria:
structures with favorable non-bond energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:I-309
Gene (Uniprot):CCL1
Chain IDs:A
Chain Length:74
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
Human CC chemokine I-309, structural consequences of the additional disulfide bond.
Biochemistry 39 6053 6059 (2000)
PMID: 10821677 DOI: 10.1021/bi000089l

Abstact

I-309 is a member of the CC subclass of chemokines and is one of only three human chemokines known to contain an additional, third disulfide bond. The three-dimensional solution structure of I-309 was determined by (1)H nuclear magnetic resonance spectroscopy and dynamic simulated annealing. The structure of I-309, which remains monomeric at high concentrations, was determined on the basis of 978 experimental restraints. The N-terminal region of I-309 was disordered, as has been previously observed for the CC chemokine eotaxin but not others such as MCP-1 and RANTES. This was followed in I-309 by a well-ordered region between residues 13 and 69 that consisted of a 3(10)-helix, a triple-stranded antiparallel beta-sheet, and finally a C-terminal alpha-helix. Root-mean-square deviations of 0.61 and 1.16 were observed for the backbone and heavy atoms, respectively. A comparison of I-309 to eotaxin and HCC-2 revealed a significant structural change in the C-terminal region of the protein. The alpha-helix normally present in chemokines was terminated early and was followed by a short section of extended strand. These changes were a direct result of the additional disulfide bond present in this protein. An examination of the I-309 structure will aid in an understanding of the specificity of this protein with its receptor, CCR8.

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