1EK8 image
Entry Detail
PDB ID:
1EK8
Keywords:
Title:
CRYSTAL STRUCTURE OF THE RIBOSOME RECYCLING FACTOR (RRF) FROM ESCHERICHIA COLI
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2000-03-07
Release Date:
2001-03-07
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.29
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:RIBOSOME RECYCLING FACTOR
Chain IDs:A
Chain Length:185
Number of Molecules:1
Biological Source:Escherichia coli
Primary Citation
Crystal structure of the ribosome recycling factor from Escherichia coli.
EMBO J. 19 2362 2370 (2000)
PMID: 10811627 DOI: 10.1093/emboj/19.10.2362

Abstact

We have determined the crystal structure of the Escherichia coli ribosome recycling factor (RRF), which catalyzes the disassembly of the termination complex in protein synthesis. The L-shaped molecule consists of two domains: a triple-stranded antiparallel coiled-coil and an alpha/beta domain. The coil domain has a cylindrical shape and negatively charged surface, which are reminiscent of the anticodon arm of tRNA and domain IV of elongation factor EF-G. We suggest that RRF binds to the ribosomal A-site through its coil domain, which is a tRNA mimic. The relative position of the two domains is changed about an axis along the hydrophobic cleft in the hinge where the alkyl chain of a detergent molecule is bound. The tRNA mimicry and the domain movement observed in RRF provide a structural basis for understanding the role of RRF in protein synthesis.

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