1EIA image
Deposition Date 1998-07-15
Release Date 1999-02-16
Last Version Date 2024-10-09
Entry Detail
PDB ID:
1EIA
Keywords:
Title:
X-RAY CRYSTAL STRUCTURE OF EQUINE INFECTIOUS ANEMIA VIRUS (EIAV) CAPSID PROTEIN P26
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
I 4 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:EIAV CAPSID PROTEIN P26
Gene (Uniprot):gag
Chain IDs:A
Chain Length:207
Number of Molecules:1
Biological Source:Equine infectious anemia virus
Primary Citation
Model for lentivirus capsid core assembly based on crystal dimers of EIAV p26.
J.Mol.Biol. 286 83 93 (1999)
PMID: 9931251 DOI: 10.1006/jmbi.1998.2443

Abstact

Two crystal forms of recombinant p26 capsid protein (CA) from the equine infectious anemia virus (EIAV) have in common an antiparallel four-helix bundle dimer interface between N-terminal domains (NTDs). The dimer interface provides a lenient scaffold to accommodate the wide sequence variation in these helices within lentivirus CA. Pairs of dimers weakly associate to form exact or approximate D2 symmetry tetramers. In one of the two crystal forms, the tetramers are linked via dimerization of C-terminal domains (CTDs). We propose that the observed NTD and CTD homodimer interactions are involved in the assembly of the lentivirus capsid. The NTD homodimer shape readily suggests a model for the mature capsid core, based on hexagonal packing with dimensions and surface topology resembling described EIAV capsid cores. Combining available data for human immunodeficiency virus and EIAV CA, we also propose an assembly pathway for maturation of the lentivirus capsid core following proteolytic cleavage of the gag polyprotein precursor.

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