1EGU image
Deposition Date 2000-02-16
Release Date 2001-02-16
Last Version Date 2024-02-07
Entry Detail
PDB ID:
1EGU
Keywords:
Title:
CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE HYALURONATE LYASE AT 1.56 A RESOLUTION
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.56 Å
R-Value Free:
0.23
R-Value Work:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:HYALURONATE LYASE
Gene (Uniprot):SP_0314
Chain IDs:A
Chain Length:731
Number of Molecules:1
Biological Source:Streptococcus pneumoniae
Ligand Molecules
Primary Citation
Structural basis of hyaluronan degradation by Streptococcus pneumoniae hyaluronate lyase.
EMBO J. 19 1228 1240 (2000)
PMID: 10716923 DOI: 10.1093/emboj/19.6.1228

Abstact

Streptococcus pneumoniae hyaluronate lyase (spnHL) is a pathogenic bacterial spreading factor and cleaves hyaluronan, an important constituent of the extra- cellular matrix of connective tissues, through an enzymatic beta-elimination process, different from the hyaluronan degradation by hydrolases in animals. The mechanism of hyaluronan binding and degradation was proposed based on the 1.56 A resolution crystal structure, substrate modeling and mutagenesis studies on spnHL. Five mutants, R243V, N349A, H399A, Y408F and N580G, were constructed and their activities confirmed our mechanism hypothesis. The important roles of Tyr408, Asn349 and His399 in enzyme catalysis were proposed, explained and confirmed by mutant studies. The remaining weak enzymatic activity of the H399A mutant, the role of the free carboxylate group on the glucuronate residue, the enzymatic behavior on chondroitin and chondroitin sulfate, and the small activity increase in the N580G mutant were explained based on this mechanism. A possible function of the C-terminal beta-sheet domain is to modulate enzyme activity through binding to calcium ions.

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Primary Citation of related structures