1EGA image
Deposition Date 1998-12-01
Release Date 1999-07-12
Last Version Date 2023-08-30
Entry Detail
PDB ID:
1EGA
Keywords:
Title:
CRYSTAL STRUCTURE OF A WIDELY CONSERVED GTPASE ERA
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.29
R-Value Work:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PROTEIN (GTP-BINDING PROTEIN ERA)
Gene (Uniprot):era
Chain IDs:A, B
Chain Length:301
Number of Molecules:2
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Crystal structure of ERA: a GTPase-dependent cell cycle regulator containing an RNA binding motif.
Proc.Natl.Acad.Sci.USA 96 8396 8401 (1999)
PMID: 10411886 DOI: 10.1073/pnas.96.15.8396

Abstact

ERA forms a unique family of GTPase. It is widely conserved and essential in bacteria. ERA functions in cell cycle control by coupling cell division with growth rate. ERA homologues also are found in eukaryotes. Here we report the crystal structure of ERA from Escherichia coli. The structure has been determined at 2.4-A resolution. It reveals a two-domain arrangement of the molecule: an N-terminal domain that resembles p21 Ras and a C-terminal domain that is unique. Structure-based topological search of the C domain fails to reveal any meaningful match, although sequence analysis suggests that it contains a KH domain. KH domains are RNA binding motifs that usually occur in tandem repeats and exhibit low sequence similarity except for the well-conserved segment VIGxxGxxIK. We have identified a betaalphaalphabeta fold that contains the VIGxxGxxIK sequence and is shared by the C domain of ERA and the KH domain. We propose that this betaalphaalphabeta fold is the RNA binding motif, the minimum structural requirement for RNA binding. ERA dimerizes in crystal. The dimer formation involves a significantly distorted switch II region, which may shed light on how ERA protein regulates downstream events.

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Primary Citation of related structures