1E9M image
Deposition Date 2000-10-24
Release Date 2001-04-09
Last Version Date 2024-05-08
Entry Detail
PDB ID:
1E9M
Title:
Ferredoxin VI from Rhodobacter Capsulatus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.07 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FERREDOXIN VI
Gene (Uniprot):fdxE
Chain IDs:A
Chain Length:106
Number of Molecules:1
Biological Source:RHODOBACTER CAPSULATUS
Ligand Molecules
Primary Citation
Crystallization and Preliminary X-Ray Diffraction Analysis of a [2Fe-2S] Ferredoxin (Fdvi) from Rhodobacter Capsulatus
Acta Crystallogr.,Sect.D 57 301 ? (2001)
PMID: 11173487 DOI: 10.1107/S0907444900017832

Abstact

A [2Fe-2S] ferredoxin found in the photosynthetic bacterium Rhodobacter capsulatus has been purified in recombinant form from Escherichia coli. This protein, called FdVI, resembles ferredoxins involved in iron-sulfur cluster biosynthesis in various prokaryotic and eukaryotic cells. Purified recombinant FdVI was recovered in high yields and appeared to be indistinguishable from the genuine R. capsulatus ferredoxin based on UV-visible absorption and EPR spectroscopy and mass spectrometry. FdVI has been crystallized in the oxidized state by a sitting-drop vapour-diffusion technique using sodium formate as precipitant. Seeding larger drops from a previous hanging-drop-grown small crystal resulted in the formation of long red-brown prismatic needles. Preliminary X-ray diffraction analysis indicated that FdVI crystals are orthorhombic and belong to the space group P2(1)2(1)2(1), with unit-cell parameters a = 45.87, b = 49.83, c = 54.29 A.

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Primary Citation of related structures