1E88 image
Deposition Date 2000-09-18
Release Date 2000-10-09
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1E88
Keywords:
Title:
Solution structure of 6F11F22F2, a compact three-module fragment of the gelatin-binding domain of human fibronectin
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
LEAST RESTRAINT VIOLATION
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FIBRONECTIN
Gene (Uniprot):FN1
Chain IDs:A
Chain Length:160
Number of Molecules:1
Biological Source:HOMO SAPIENS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
The Hairpin Structure of the (6)F1(1)F2(2)F2 Fragment from Human Fibronectin Enhances Gelatin Binding
Embo J. 20 1519 1529 (2001)
PMID: 11285216 DOI: 10.1093/EMBOJ/20.7.1519

Abstact

The solution structure of the (6)F1(1)F2(2)F2 fragment from the gelatin-binding region of fibronectin has been determined (Protein Data Bank entry codes 1e88 and 1e8b). The structure reveals an extensive hydrophobic interface between the non-contiguous (6)F1 and (2)F2 modules. The buried surface area between (6)F1 and (2)F2 ( approximately 870 A(2)) is the largest intermodule interface seen in fibronectin to date. The dissection of (6)F1(1)F2(2)F2 into the (6)F1(1)F2 pair and (2)F2 results in near-complete loss of gelatin-binding activity. The hairpin topology of (6)F1(1)F2(2)F2 may facilitate intramolecular contact between the matrix assembly regions flanking the gelatin-binding domain. This is the first high-resolution study to reveal a compact, globular arrangement of modules in fibronectin. This arrangement is not consistent with the view that fibronectin is simply a linear 'string of beads'.

Legend

Protein

Chemical

Disease

Primary Citation of related structures