1DL2 image
Deposition Date 1999-12-08
Release Date 2000-02-18
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1DL2
Keywords:
Title:
CRYSTAL STRUCTURE OF CLASS I ALPHA-1,2-MANNOSIDASE FROM SACCHAROMYCES CEREVISIAE AT 1.54 ANGSTROM RESOLUTION
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.54 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CLASS I ALPHA-1,2-MANNOSIDASE
Gene (Uniprot):MNS1
Chain IDs:A
Chain Length:511
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
Primary Citation
Crystal structure of a class I alpha1,2-mannosidase involved in N-glycan processing and endoplasmic reticulum quality control.
EMBO J. 19 581 588 (2000)
PMID: 10675327 DOI: 10.1093/emboj/19.4.581

Abstact

Mannose trimming is not only essential for N-glycan maturation in mammalian cells but also triggers degradation of misfolded glycoproteins. The crystal structure of the class I alpha1, 2-mannosidase that trims Man(9)GlcNAc(2) to Man(8)GlcNAc(2 )isomer B in the endoplasmic reticulum of Saccharomyces cerevisiae reveals a novel (alphaalpha)(7)-barrel in which an N-glycan from one molecule extends into the barrel of an adjacent molecule, interacting with the essential acidic residues and calcium ion. The observed protein-carbohydrate interactions provide the first insight into the catalytic mechanism and specificity of this eukaryotic enzyme family and may be used to design inhibitors that prevent degradation of misfolded glycoproteins in genetic diseases.

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Primary Citation of related structures