1DDJ image
Deposition Date 1999-11-10
Release Date 2000-02-18
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1DDJ
Keywords:
Title:
CRYSTAL STRUCTURE OF HUMAN PLASMINOGEN CATALYTIC DOMAIN
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.26
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PLASMINOGEN
Gene (Uniprot):PLG
Mutagens:S741A
Chain IDs:A, B, C, D
Chain Length:247
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Human plasminogen catalytic domain undergoes an unusual conformational change upon activation.
J.Mol.Biol. 295 903 914 (2000)
PMID: 10656799 DOI: 10.1006/jmbi.1999.3397

Abstact

Activation of the serine protease plasmin from its zymogen, plasminogen, is the key step in fibrinolysis leading to blood clot dissolution. It also plays critical roles in cell migration, such as in tumor metastasis. Here, we report the crystal structure of an inactive S741A mutant of human plasminogen catalytic domain at 2.0 A resolution. This structure permits a direct comparison with that of the plasmin catalytic unit. Unique conformational differences are present between these two structures that are not seen in other zymogen-enzyme pairs of the trypsin family. The functional significance of these differences and the structural basis of plasminogen activation is discussed in the light of this new structure.

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Primary Citation of related structures
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