1D59 image
Deposition Date 1992-02-25
Release Date 1993-04-15
Last Version Date 2024-02-07
Entry Detail
PDB ID:
1D59
Keywords:
Title:
CRYSTAL STRUCTURE OF 4-STRANDED OXYTRICHA TELOMERIC DNA
Biological Source:
Source Organism:
(Taxon ID: ) (Taxon ID: )
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3')
Chain IDs:A, B, C, D
Chain Length:12
Number of Molecules:4
Biological Source:
Ligand Molecules
Primary Citation
Crystal structure of four-stranded Oxytricha telomeric DNA.
Nature 356 126 131 (1992)
PMID: 1545863 DOI: 10.1038/356126a0

Abstact

The sequence d(GGGGTTTTGGGG) from the 3' overhang of the Oxytricha telomere has been crystallized and its three-dimensional structure solved to 2.5 A resolution. The oligonucleotide forms hairpins, two of which join to make a four-stranded helical structure with the loops containing four thymine residues at either end. The guanine residues are held together by cyclic hydrogen bonding and an ion is located in the centre. The four guanine residues in each segment have a glycosyl conformation that alternates between anti and syn. There are two four-stranded molecules in the asymmetric unit showing that the structure has some intrinsic flexibility.

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Primary Citation of related structures