1CFM image
Deposition Date 1998-09-18
Release Date 1999-04-27
Last Version Date 2024-10-23
Entry Detail
PDB ID:
1CFM
Title:
CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CYTOCHROME F
Gene (Uniprot):petA
Chain IDs:A, B, C
Chain Length:251
Number of Molecules:3
Biological Source:Chlamydomonas reinhardtii
Ligand Molecules
Primary Citation
X-ray structure of a truncated form of cytochrome f from chlamydomonas reinhardtii.
Biochemistry 39 7689 7701 (2000)
PMID: 10869174 DOI: 10.1021/bi000090k

Abstact

A truncated form of cytochrome f from Chlamydomonas reinhardtii (an important eukaryotic model organism for photosynthetic electron transfer studies) has been crystallized (space group P2(1)2(1)2(1); three molecules/asymmetric unit) and its structure determined to 2.0 A resolution by molecular replacement using the coordinates of a truncated turnip cytochrome f as a model. The structure displays the same folding and detailed features as turnip cytochrome f, including (a) an unusual heme Fe ligation by the alpha-amino group of tyrosine 1, (b) a cluster of lysine residues (proposed docking site of plastocyanin), and (c) the presence of a chain of seven water molecules bound to conserved residues and extending between the heme pocket and K58 and K66 at the lysine cluster. For this array of waters, we propose a structural role. Two cytochrome f molecules are related by a noncrystallographic symmetry operator which is a distorted proper 2-fold rotation. This may represent the dimeric relation of the monomers in situ; however, the heme orientation suggested by this model is not consistent with previous EPR measurements on oriented membranes.

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Primary Citation of related structures