1BZY image
Deposition Date 1998-11-05
Release Date 1999-06-22
Last Version Date 2024-05-22
Entry Detail
PDB ID:
1BZY
Title:
HUMAN HGPRTASE WITH TRANSITION STATE INHIBITOR
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
Gene (Uniprot):HPRT1
Chain IDs:A, B, C, D
Chain Length:217
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
The 2.0 A structure of human hypoxanthine-guanine phosphoribosyltransferase in complex with a transition-state analog inhibitor.
Nat.Struct.Biol. 6 588 593 (1999)
PMID: 10360366 DOI: 10.1038/9376

Abstact

The structure of human HGPRT bound to the transition-state analog immucillinGP and Mg2+-pyrophosphate has been determined to 2.0 A resolution. ImmucillinGP was designed as a stable analog with the stereoelectronic features of the transition state. Bound inhibitor at the catalytic site indicates that the oxocarbenium ion of the transition state is stabilized by neighboring-group participation from MgPPi and O5'. A short hydrogen bond forms between Asp 137 and the purine ring analog. Two Mg2+ ions sandwich the pyrophosphate and contact both hydroxyls of the ribosyl analog. The transition-state analog is shielded from bulk solvent by a catalytic loop that moves approximately 25 A to cover the active site and becomes an ordered antiparallel beta-sheet.

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Primary Citation of related structures