1BXV image
Deposition Date 1998-10-09
Release Date 1999-06-15
Last Version Date 2024-04-03
Entry Detail
PDB ID:
1BXV
Keywords:
Title:
REDUCED PLASTOCYANIN FROM SYNECHOCOCCUS SP.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.15
Space Group:
P 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PLASTOCYANIN
Gene (Uniprot):petE
Chain IDs:A
Chain Length:91
Number of Molecules:1
Biological Source:Synechococcus elongatus
Ligand Molecules
Primary Citation
Crystal structure determinations of oxidized and reduced plastocyanin from the cyanobacterium Synechococcus sp. PCC 7942.
Biochemistry 38 6063 6069 (1999)
PMID: 10320332 DOI: 10.1021/bi9824442

Abstact

The crystal structures of oxidized and reduced plastocyanins from Synechococcus sp. PCC 7942 have been determined at 1.9 and 1.8 A resolution, respectively, at pH 5.0. The protein consists of only 91 amino acid residues, the smallest number known for a plastocyanin, and apparently lacks the mostly conserved acidic patch that is believed to be important for recognition with electron-transfer partners. The protein has two acidic residues, Glu42 and Glu85, around Tyr83, which is thought to be a possible conduit for electrons, but these are neutralized by Arg88 and Lys58. Residue Arg88 interacts with Tyr83 through a pi-pi interaction in which the guanidinium group of the former completely overlaps the aromatic ring of the tyrosine. Reduction of the protein at pH 5.0 causes a lengthening of one Cu-N(His) bond by 0.36 A, despite the small rms deviation of 0.08 A calculated for the backbone atoms. Moreover, significant conformational changes of Arg88 and Lys58, along with the movement of a water molecule adjacent to the OH group of Tyr83, were observed on reduction; the guanidinium group of Arg88 rotates by more than 11 degrees, and the water molecule moves by 0.42 A. The changes around the copper site and the alterations around Tyr83 may be linked to the reduction of the copper.

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Disease

Primary Citation of related structures