1BS9 image
Deposition Date 1998-09-01
Release Date 1999-05-18
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1BS9
Title:
ACETYLXYLAN ESTERASE FROM P. PURPUROGENUM REFINED AT 1.10 ANGSTROMS
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.10 Å
R-Value Free:
0.18
R-Value Observed:
0.12
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ACETYL XYLAN ESTERASE
Gene (Uniprot):axe-2
Chain IDs:A
Chain Length:207
Number of Molecules:1
Biological Source:Penicillium purpurogenum
Ligand Molecules
Primary Citation
Determination of a protein structure by iodination: the structure of iodinated acetylxylan esterase.
Acta Crystallogr.,Sect.D 55 779 784 (1999)
PMID: 10089308 DOI: 10.1107/S0907444999000244

Abstact

Enzymatic and non-enzymatic iodination of the amino acid tyrosine is a well known phenomenon. The iodination technique has been widely used for labeling proteins. Using high-resolution X-ray crystallographic techniques, the chemical and three-dimensional structures of iodotyrosines formed by non-enzymatic incorporation of I atoms into tyrosine residues of a crystalline protein are described. Acetylxylan esterase (AXE II; 207 amino-acid residues) from Penicillium purpurogenum has substrate specificities towards acetate esters of D-xylopyranose residues in xylan and belongs to a new class of alpha/beta hydrolases. The crystals of the enzyme are highly ordered, tightly packed and diffract to better than sub-angstrom resolution at 85 K. The iodination technique has been utilized to prepare an isomorphous derivative of the AXE II crystal. The structure of the enzyme determined at 1.10 A resolution exclusively by normal and anomalous scattering from I atoms, along with the structure of the iodinated complex at 1.80 A resolution, demonstrate the formation of covalent bonds between I atoms and C atoms at ortho positions to the hydroxyl groups of two tyrosyl moieties, yielding iodotyrosines.

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Primary Citation of related structures